GENOTEXT (GENOmics conTEXT) is an automated sytem that determines the experimental context of samples and data sets in the NCBI Gene Expression Omnibus. It extracts the contextual identifiers and annotations of samples and models these annotations using the largest available compendium of biomedical vocabularies, the Unified Medical Language System (UMLS).
The program and its results are pending publication.
The following software is available from this project. These programs are not meant to be downloaded and run; each will need modifications for ones own computer system and database structure.
Funding for this work was provided in part by:
Updated January 10, 2006